Furlong, Eileen E. M.: search on Z-Library

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1

The degree of enhancer or promoter activity is reflected by the levels and directionality of eRNA transcription

Mikhaylichenko, Olga, Bondarenko, Vladyslav, Harnett, Dermot, Schor, Ignacio E., Males, Matilda, Viales, Rebecca R., Furlong, Eileen E.M.

Journal:

Genes & Development

Year:

2018

Language:

english

File:

PDF, 12.31 MB

english, 2018

2

Accurate genome-wide predictions of spatio-temporal gene expression during embryonic development

Zhou, Jian, Schor, Ignacio E., Yao, Victoria, Theesfeld, Chandra L., Marco-Ferreres, Raquel, Tadych, Alicja, Furlong, Eileen E. M., Troyanskaya, Olga G., Desplan, Claude

Journal:

Year:

2019

Language:

english

File:

PDF, 11.56 MB

english, 2019

3

Fragmentation of DNA in a sub-microliter microfluidic sonication device

Tseng, Qingzong, Lomonosov, Alexey M., Furlong, Eileen E. M., Merten, Christoph A.

Journal:

Year:

2012

Language:

english

File:

PDF, 977 KB

english, 2012

4

A versatile, low-cost, multi-way microfluidic sorter for droplets, cells and embryos

Utharala, Ramesh, Tseng, Qingzong, Furlong, Eileen E. M., Merten, Christoph A.

Journal:

Analytical Chemistry

Year:

2018

Language:

english

File:

PDF, 1.64 MB

english, 2018

5

ChIP-on-chip protocol for genome-wide analysis of transcription factor binding in Drosophila melanogaster embryos

Sandmann, Thomas, Jakobsen, Janus S, Furlong, Eileen E M

Journal:

Nature Protocols

Year:

2007

Language:

english

File:

PDF, 595 KB

english, 2007

6

Promoter shape varies across populations and affects promoter evolution and expression noise

Schor, Ignacio E, Degner, Jacob F, Harnett, Dermot, Cannavò, Enrico, Casale, Francesco P, Shim, Heejung, Garfield, David A, Birney, Ewan, Stephens, Matthew, Stegle, Oliver, Furlong, Eileen E M

Journal:

Nature Genetics

Year:

2017

Language:

english

File:

PDF, 1.64 MB

english, 2017

7

Accurate genome-wide predictions of spatio-temporal gene expression during embryonic development

Zhou, Jian, Schor, Ignacio E., Yao, Victoria, Theesfeld, Chandra L., Marco-Ferreres, Raquel, Tadych, Alicja, Furlong, Eileen E. M., Troyanskaya, Olga G., Desplan, Claude

Journal:

Year:

2019

File:

PDF, 11.56 MB

2019

8

The road ahead in genetics and genomics

McGuire, Amy L., Gabriel, Stacey, Tishkoff, Sarah A., Wonkam, Ambroise, Chakravarti, Aravinda, Furlong, Eileen E. M., Treutlein, Barbara, Meissner, Alexander, Chang, Howard Y., LÃ³pez-Bigas, NÃºria, S

Journal:

Nature Reviews Genetics

Year:

2020

File:

PDF, 1.09 MB

2020

9

Conservation and divergence in developmental networks: a view from Drosophila myogenesis

Lucia Ciglar, Eileen EM Furlong

Journal:

Current Opinion in Cell Biology

Year:

2009

Language:

english

File:

PDF, 243 KB

english, 2009

10

Je, a versatile suite to handle multiplexed NGS libraries with unique molecular identifiers

Girardot, Charles, Scholtalbers, Jelle, Sauer, Sajoscha, Su, Shu-Yi, Furlong, Eileen E.M.

Journal:

BMC Bioinformatics

Year:

2016

Language:

english

File:

PDF, 632 KB

english, 2016

11

The Insulator Protein CTCF Is Required for Correct Hox Gene Expression, but Not for Embryonic Development in Drosophila

Gambetta, Maria Cristina, Furlong, Eileen E. M.

Journal:

Year:

2018

Language:

english

File:

PDF, 2.38 MB

english, 2018

12

Chromatin topology, condensates and gene regulation: shifting paradigms or just a phase?

Mir, Mustafa, Bickmore, Wendy, Furlong, Eileen E. M., Narlikar, Geeta

Journal:

Development (The Company of Biologists)

Year:

2019

File:

PDF, 345 KB

2019

13

Non-coding RNA Expression, Function, and Variation during Drosophila Embryogenesis

Schor, Ignacio E., Bussotti, Giovanni, Maleš, Matilda, Forneris, Mattia, Viales, Rebecca R., Enright, Anton J., Furlong, Eileen E.M.

Journal:

Current Biology

Year:

2018

Language:

english

File:

PDF, 4.70 MB

english, 2018

14

Integrating transcriptional and signalling networks during muscle development

Eileen E Furlong

Journal:

Current Opinion in Genetics & Development

Year:

2004

Language:

english

File:

PDF, 331 KB

english, 2004

15

Cell type–specific chromatin immunoprecipitation from multicellular complex samples using BiTS-ChIP

Bonn, Stefan, Zinzen, Robert P, Perez-Gonzalez, Alexis, Riddell, Andrew, Gavin, Anne-Claude, Furlong, Eileen E M

Journal:

Bioentrepreneur

Year:

2012

Language:

english

File:

PDF, 1.42 MB

english, 2012

16

Lineage-Resolved Enhancer and Promoter Usage during a Time Course of Embryogenesis

Reddington, James P., Garfield, David A., Sigalova, Olga M., Karabacak Calviello, Aslihan, Marco-Ferreres, Raquel, Girardot, Charles, Viales, Rebecca R., Degner, Jacob F., Ohler, Uwe, Furlong, Eileen

Journal:

Developmental Cell

Year:

2020

File:

PDF, 6.26 MB

2020

17

Combinatorial binding predicts spatio-temporal cis-regulatory activity

Zinzen, Robert P., Girardot, Charles, Gagneur, Julien, Braun, Martina, Furlong, Eileen E. M.

Journal:

Year:

2009

Language:

english

File:

PDF, 1.21 MB

english, 2009

18

Production of dihydrothymidine stereoisomers in DNA by .gamma.-irradiation

Furlong, Eileen A., Jorgensen, Timothy J., Henner, William D.

Journal:

Year:

1986

Language:

english

File:

PDF, 747 KB

english, 1986

19

Enhancer loops appear stable during development and are associated with paused polymerase

Ghavi-Helm, Yad, Klein, Felix A., Pakozdi, Tibor, Ciglar, Lucia, Noordermeer, Daan, Huber, Wolfgang, Furlong, Eileen E. M.

Journal:

Year:

2014

Language:

english

File:

PDF, 8.74 MB

english, 2014

20

Model-based method for transcription factor target identification with limited data

Antti Honkela, Charles Girardot, E. Hilary Gustafson, Ya-Hsin Liu, Eileen E. M. Furlong, Neil D. Lawrence, Magnus Rattray and David Baker

Journal:

Proceedings of the National Academy of Sciences

Year:

2010

File:

PDF, 1.66 MB

2010

21

A Temporal Map of Transcription Factor Activity: Mef2 Directly Regulates Target Genes at All Stages of Muscle Development

Thomas Sandmann, Lars J. Jensen, Janus S. Jakobsen, Michal M. Karzynski, Michael P. Eichenlaub, Peer Bork, Eileen E.M. Furlong

Journal:

Developmental Cell

Year:

2006

Language:

english

File:

PDF, 667 KB

english, 2006

22

Logical modelling of Drosophila signalling pathways

Mbodj, Abibatou, Junion, Guillaume, Brun, Christine, Furlong, Eileen E. M., Thieffry, Denis

Journal:

Molecular BioSystems

Year:

2013

Language:

english

File:

PDF, 3.40 MB

english, 2013

23

10.1038/84422

Furlong, Eileen E.M., Profitt, David, Scott, Matthew P.

Journal:

Nature Biotechnology

Year:

2001

Language:

english

File:

PDF, 1.71 MB

english, 2001

24

Enhanced function annotations for Drosophila serine proteases: A case study for systematic annotation of multi-member gene families

Parantu K. Shah, Lokesh P. Tripathi, Lars Juhl Jensen, Murad Gahnim, Christopher Mason, Eileen E. Furlong, Veronica Rodrigues, Kevin P. White, Peer Bork, R. Sowdhamini

Journal:

Year:

2008

Language:

english

File:

PDF, 2.40 MB

english, 2008

25

Network Analysis of the Multidimensional Symptom Experience of Oncology

Papachristou, Nikolaos, Barnaghi, Payam, Cooper, Bruce, Kober, Kord M., Maguire, Roma, Paul, Steven M., Hammer, Marilyn, Wright, Fay, Armes, Jo, Furlong, Eileen P., McCann, Lisa, Conley, Yvette P., Pa

Journal:

Scientific Reports

Year:

2019

Language:

english

File:

PDF, 1.74 MB

english, 2019

26

The oncology nursing development project: Background and implementation

Joan Kelly, Eileen Furlong, Kathy Redmond

Journal:

European Journal of Oncology Nursing

Year:

1999

Language:

english

File:

PDF, 651 KB

english, 1999

27

Model-based method for transcription factor target identification with limited data

Honkela, Antti, Girardot, Charles, Gustafson, E. Hilary, Liu, Ya-Hsin, Furlong, Eileen E. M., Lawrence, Neil D., Rattray, Magnus

Journal:

Proceedings of the National Academy of Sciences

Year:

2010

Language:

english

File:

PDF, 347 KB

english, 2010

28

Opbp is a new architectural/insulator protein required for ribosomal gene expression

Zolotarev, Nikolay, Maksimenko, Oksana, Kyrchanova, Olga, Sokolinskaya, Elena, Osadchiy, Igor, Girardot, Charles, Bonchuk, Artem, Ciglar, Lucia, Furlong, Eileen E. M., Georgiev, Pavel

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 5.75 MB

english, 2017

29

Tissue-specific analysis of chromatin state identifies temporal signatures of enhancer activity during embryonic development

Zinzen, Robert P, Girardot, Charles, Gustafson, E Hilary, Perez-Gonzalez, Alexis, Delhomme, Nicolas, Ghavi-Helm, Yad, Wilczyński, Bartek, Riddell, Andrew, Furlong, Eileen E M, Bonn, Stefan

Journal:

Nature Genetics

Year:

2012

Language:

english

File:

PDF, 2.26 MB

english, 2012

30

Transcription factors: from enhancer binding to developmental control

Spitz, François, Furlong, Eileen E. M.

Journal:

Nature Reviews Genetics

Year:

2012

Language:

english

File:

PDF, 1.07 MB

english, 2012

31

A Transcription Factor Collective Defines Cardiac Cell Fate and Reflects Lineage History

Guillaume Junion, Mikhail Spivakov, Charles Girardot, Martina Braun, E. Hilary Gustafson, Ewan Birney, Eileen E.M. Furlong

Journal:

Year:

2012

Language:

english

File:

PDF, 2.13 MB

english, 2012

32

A Functional Genomics Approach to Identify New Regulators of Wnt Signaling

Eileen E. Furlong

Journal:

Developmental Cell

Year:

2005

Language:

english

File:

PDF, 114 KB

english, 2005

33

cis-Regulatory networks during development: a view of Drosophila

Stefan Bonn, Eileen E.M. Furlong

Journal:

Current Opinion in Genetics & Development

Year:

2008

Language:

english

File:

PDF, 909 KB

english, 2008

34

Corrigendum: Enhancer loops appear stable during development and are associated with paused polymerase

Ghavi-Helm, Yad, Klein, Felix A., Pakozdi, Tibor, Ciglar, Lucia, Noordermeer, Daan, Huber, Wolfgang, Furlong, Eileen E. M.

Journal:

Year:

2016

File:

PDF, 398 KB

2016

35

Using Co-Design to Develop a Collective Leadership Intervention for Healthcare Teams to Improve Safety Culture

Ward, Marie E., De Brún, Aoife, Beirne, Deirdre, Conway, Clare, Cunningham, Una, English, Alan, Fitzsimons, John, Furlong, Eileen, Kane, Yvonne, Kelly, Alan, McDonnell, Sinéad, McGinley, Sinead, Monag

Journal:

International Journal of Environmental Research and Public Health

Year:

2018

Language:

english

File:

PDF, 550 KB

english, 2018

36

The role of chromatin accessibility in cis-regulatory evolution

Peng, Pei-Chen, Khoueiry, Pierre, Girardot, Charles, Reddington, James P, Garfield, David A, Furlong, Eileen E M, Sinha, Saurabh, Zufall, Rebecca

Journal:

Genome Biology and Evolution

Year:

2019

File:

PDF, 4.22 MB

2019

37

Cis -acting variation is common across regulatory layers but is often buffered during embryonic development

Floc'hlay, Swann, Wong, Emily, Zhao, Bingqing, Viales, Rebecca R, Thomas-Chollier, Morgane, Thieffry, Denis, Garfield, David A, Furlong, Eileen E. M.

Journal:

Genome Research

Year:

2020

File:

PDF, 1.71 MB

2020

38

Mes2, a MADF-containing transcription factor essential for Drosophila development

Gregor Zimmermann, Eileen E. Furlong, Kaye Suyama, Matthew P. Scott

Journal:

Developmental Dynamics

Year:

2006

Language:

english

File:

PDF, 512 KB

english, 2006

39

Divergence incis-regulatory networks: taking the 'species' out of cross-species analysis

Robert P Zinzen, Eileen EM Furlong

Journal:

Year:

2008

Language:

english

File:

PDF, 56 KB

english, 2008

40

Subtle Changes in Motif Positioning Cause Tissue-Specific Effects on Robustness of an Enhancer's Activity

Erceg, Jelena, Saunders, Timothy E., Girardot, Charles, Devos, Damien P., Hufnagel, Lars, Furlong, Eileen E. M., Levine, Michael

Journal:

Year:

2014

Language:

english

File:

PDF, 9.89 MB

english, 2014

41

Model-based method for transcription factor target identification with limited data

Antti Honkela, Charles Girardot, E. Hilary Gustafson, Ya-Hsin Liu, Eileen E. M. Furlong, Neil D. Lawrence, Magnus Rattray and David Baker

Journal:

Proceedings of the National Academy of Sciences

Year:

2010

Language:

english

File:

PDF, 1.66 MB

english, 2010

42

Correlation Does Not Imply Causation: Histone Methyltransferases, but Not Histone Methylation, SET the Stage for Enhancer Activation

Pollex, Tim, Furlong, Eileen E.M.

Journal:

Year:

2017

Language:

english

File:

PDF, 601 KB

english, 2017

43

The eSMART study protocol: a randomised controlled trial to evaluate electronic symptom management using the advanced symptom management system (ASyMS) remote technology for patients with cancer

Maguire, Roma, Fox, Patricia A, McCann, Lisa, Miaskowski, Christine, Kotronoulas, Grigorios, Miller, Morven, Furlong, Eileen, Ream, Emma, Armes, Jo, Patiraki, Elisabeth, Gaiger, Alexander, Berg, Geir

Journal:

Year:

2017

Language:

english

File:

PDF, 629 KB

english, 2017

44

Developmental enhancers and chromosome topology

Furlong, Eileen E. M., Levine, Michael

Journal:

Year:

2018

Language:

english

File:

PDF, 1.02 MB

english, 2018

45

Advanced nursing practice: policy, education and role development

Eileen Furlong, Rita Smith

Journal:

Journal of Clinical Nursing

Year:

2005

Language:

english

File:

PDF, 76 KB

english, 2005

46

Combinatorial Binding Leads to Diverse Regulatory Responses: Lmd Is a Tissue-Specific Modulator of Mef2 Activity

Cunha, Paulo M. F., Sandmann, Thomas, Gustafson, E. Hilary, Ciglar, Lucia, Eichenlaub, Michael P., Furlong, Eileen E. M., Schübeler, Dirk

Journal:

Year:

2010

Language:

english

File:

PDF, 2.79 MB

english, 2010

47

A Systematic Analysis of Tinman Function Reveals Eya and JAK-STAT Signaling as Essential Regulators of Muscle Development

Ya-Hsin Liu, Janus S. Jakobsen, Guillaume Valentin, Ioannis Amarantos, Darren T. Gilmour, Eileen E.M. Furlong

Journal:

Developmental Cell

Year:

2009

Language:

english

File:

PDF, 2.41 MB

english, 2009

48

Challenges for modeling global gene regulatory networks during development: Insights from Drosophila

Bartek Wilczynski, Eileen E.M. Furlong

Journal:

Developmental Biology

Year:

2010

Language:

english

File:

PDF, 537 KB

english, 2010

49

Genomics and Development: Taking Developmental Biology to New Heights

François Spitz, Eileen E.M. Furlong

Journal:

Developmental Cell

Year:

2006

Language:

english

File:

PDF, 344 KB

english, 2006

50

Trihalomethane levels in chlorinated Michigan drinking water

Furlong, Eileen A.-N., D'Itri, Frank M.

Journal:

Ecological Modelling

Year:

1986

Language:

english

File:

PDF, 528 KB

english, 1986

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